PUBLICATIONS
Peer reviewed publications
Dundore-Arias, JP, Michalska-Smith, M, Millican, M, and Kinkel, L.L. 202X. More than the Sum of its Parts: Unlocking the Power of Network Structure for Understanding Organization and Function in Microbiomes. Ann. Rev. Phytophathol. in press.
Milligan-McClellan, K, Dundore-Arias, JP, Klassen, J, Shade, A, Kinkel, L, and Wolfe, B. 2022. Deciphering the Microbiome: Integrating Theory, New Technologies, and Inclusive Science. mSystems. DOI: https://doi.org/10.1128/msystems.00583-22.
Henkhaus, N, Busch, W, Chen, A, Colón-Carmona, A, Cothran, M, Diaz, N, Dundore-Arias, JP, et al. 2022. Removing Systemic Barriers to Equity, Diversity, and Inclusion: Report of the 2019 Plant Science Research Network workshop “Inclusivity in the Plant Sciences”. Plant Direct 6(8)e432. doi.org/10.1002/pld3.432
Crants, JE, Kinkel, LL, Dundore-Arias, JP, Robinson AP, Gudmestad, NC, and Rosen, CJ. 2021. Potato Nitrogen Response and Soil Microbial Activity as Affected by Fumigation. American Journal of Potato Research. doi.org/10.1007/s12230-021-09843-2.
Vangay, P, Burgin, J, Johnston, A, Beck, KL, Berrios, DC, … Dundore-Arias JP, et al. 2021. Microbiome Metadata Standards: Report of the National Microbiome Data Collaborative’s Workshop and follow-on activities. mSystems 6(1)e01194-20. doi: 10.1128/mSystems.01194-20.
Fulcher MR, Bolton ML, Millican MD, Michalska-Smith MJ, Dundore-Arias JP, et al. 2020. Broadening participation in scientific conferences during the era of social distancing. Trends in Microb. 28:12 949. doi.org/10.1016/j.tim.2020.08.004.
Henkhaus N, Bartlett M, Gang D, … Dundore-Arias JP, et al. 2020. Plant science decadal vision 2020–2030: Reimagining the potential of plants for a healthy and sustainable future. Plant Direct. 2020;00: 1–24. doi.org/10.1002/pld3.252.
Dundore-Arias JP, Eloe-Fadrosh E., Schriml L., Beattie, G., Brennan, F., Busby, P., Calderon, R., Castle, S., Emerson, J., Everhart, S., Eversole, K., Frost, K., Herr, J., Huerta, A., Iyer-Pascuzzi, A., Kalil, A., Leach, J., Leonard, J., Maul, J., Prithiviraj, B., Potrykus, M., Redekar, N., Rojas, J., Silverstein, K., Tomso, D., Tringe, S., Vinatzer, B., and Kinkel, L. 2020. Community-driven Metadata Standards for Agricultural Microbiome Research. Phytobiomes Journal doi: 10.1094/PBIOMES-09-19-0051-P.
Dundore-Arias JP, Castle S, Felice L, Dill-Macky R and Kinkel LL. 2020. Carbon Amendments Influence Composition and Functional Capacities of Indigenous Soil Microbiomes. Front. Mol. Biosci. 6:151. doi: 10.3389/fmolb.2019.00151.
Dundore-Arias JP, Felice L, Dill-Macky R and Kinkel LL. 2019. Carbon Amendments Induce Shifts in Nutrient Use, Inhibitory, and Resistance Phenotypes Among Soilborne Streptomyces. Front. Microbiol. 10:498. doi: 10.3389/fmicb.2019.00498.
Dundore-Arias JP and Barak JD. 2017. “Plant Associated Foodborne Pathogens.” In: A.P. Keinath, W.M. Wintermantel, and T.A. Zitter (Eds.), Compendium of Cucurbit Diseases and Pests (pp. 17-19). APS Press, St. Paul.
Dundore-Arias JP and Barak JD. 2016. “Food Safety.” In: K.V. Subbarao, R.M. Davis, R.L. Gilbertson, and R.N. Raid (Eds.), Compendium of Lettuce Diseases and Pests (pp. 22-24). APS Press, St. Paul.
Dundore-Arias JP, Groves RL, and Barak JD. 2015. Persistence of ingested Salmonella enterica in the leafhopper Macrosteles quadrilineatus is influenced by prgH. App. Environ. Microbiol. 81(18): 6345-6354. doi: 10.1128/AEM.01464-15.
Soto-Arias JP, Groves RL, and Barak JD. 2014. Transmission and Retention of Salmonella enterica by Phytophagous Hemipteran Insects. App. Environ. Microbiol. 80(17): 5447-5456. doi: 10.1128/AEM.01444-14.
Potnis N, Soto-Arias JP, Cowles K, van Bruggen AHC, Jones JB, and Barak JD. 2014. Xanthomonas perforans colonization influences Salmonella enterica in the tomato phyllosphere. App. Environ. Microbiol. 80(10): 3173-3180. doi: 10.1128/AEM.00345-14.
Soto-Arias JP, Groves RL, and Barak JD. 2013. Interaction of phytophagous insects with Salmonella enterica on plants and enhanced persistence of the pathogen with Macrosteles quadrilineatus infestation or Frankliniella occidentalis feeding. PLoS ONE 8(10): e79404. doi: doi.org/10.1371/journal.pone.0079404.
Soto-Arias JP and Munkvold G. 2010. Effects of virus infection on susceptibility of soybean plants to Phomopsis longicolla. Plant Disease 95(5): 530-536. doi: 10.1094/PDIS-10-10-0767.
Soto-Arias JP and Munkvold G. 2010. Impacts of foliar fungicides on infection of soybean by Phomopsis spp. in Iowa. Crop Protection 30(5): 577-580. doi: 10.1016/j.cropro.2010.11.018.
Extension and outreach publication
Dundore-Arias, JP and Smith, R. 2022. Pythium wilt of lettuce, biology and control. CAPCA ADVISER Vol XXV, No. 2, 2022. https://capca.com/publication/adviser-magazine-april-2022/
Smith, R, Dundore Arias, JP, Richardson, K, Wang, YC, and Love, T. 2022 Lettuce Variety Tolerance to Pythium Wilt. https://ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=46137
Smith, R, Dundore-Arias, JP, and Cahn, M. 2022. Research Update on Control of Pythium Wilt on Lettuce. https://ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=51256
Smith, R, and Dundore-Arias, JP, and Koike, S. 2021. Identification of Pythium wilt of lettuce in the field. ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=46137
Smith, R, and Dundore-Arias, JP. 2020. Strategies to Control Pythium wilt of Lettuce. https://ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=44174
Smith, R, Dundore-Arias, JP, Hasegawa, D, and Koike, S. 2020. Observations of Pythium and INSV Infections in Lettuce Fields. ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=43736
Hasegawa DH, Del-Pozo A, Dundore-Arias JP. 2020. Documenting the impact of Western flower thrips and Impatient Necrotic Spot Virus (INSV) in lettuce fields in the Salinas Valley. CAPCA ADVISER 2020.
Thompson, Luke, Vangay, Pajau, Blumberg, Kai, Christianson, Danielle, Dundore-Arias, Jose Pablo, Hu, Bin, Timme, Ruth, and Wood-Charlson, Elisha. Introduction to Metadata and Ontologies: Everything You Always Wanted to Know About Metadata and Ontologies (But Were Afraid to Ask). United States: N. p., 2020. Web. doi:10.25979/1607365.
Smith, R, Dundore Arias, JP, Richardson, K, Wang, YC, and Love, T. 2022 Lettuce Variety Tolerance to Pythium Wilt. https://ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=46137
Smith, R, Dundore-Arias, JP, and Cahn, M. 2022. Research Update on Control of Pythium Wilt on Lettuce. https://ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=51256
Smith, R, and Dundore-Arias, JP, and Koike, S. 2021. Identification of Pythium wilt of lettuce in the field. ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=46137
Smith, R, and Dundore-Arias, JP. 2020. Strategies to Control Pythium wilt of Lettuce. https://ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=44174
Smith, R, Dundore-Arias, JP, Hasegawa, D, and Koike, S. 2020. Observations of Pythium and INSV Infections in Lettuce Fields. ucanr.edu/blogs/blogcore/postdetail.cfm?postnum=43736
Hasegawa DH, Del-Pozo A, Dundore-Arias JP. 2020. Documenting the impact of Western flower thrips and Impatient Necrotic Spot Virus (INSV) in lettuce fields in the Salinas Valley. CAPCA ADVISER 2020.
Thompson, Luke, Vangay, Pajau, Blumberg, Kai, Christianson, Danielle, Dundore-Arias, Jose Pablo, Hu, Bin, Timme, Ruth, and Wood-Charlson, Elisha. Introduction to Metadata and Ontologies: Everything You Always Wanted to Know About Metadata and Ontologies (But Were Afraid to Ask). United States: N. p., 2020. Web. doi:10.25979/1607365.